Chapter 8

How Did Yeast Become a Wine Maker?

 

Lesson 8.1

An Evolutionary History of Wine-Making

 

Lesson 8.2

Identifying Genes Responsible for the Diauxic Shift

 

Introduction to Clustering

Lesson 8.3

 

Lesson 8.4

The Good Clustering Principle

 

Clustering as an Optimization Problem

Lesson 8.5

 

Farthest First Traversal

Lesson 8.6

 

k-Means Clustering

Lesson 8.7

 

The Lloyd Algorithm

Lesson 8.8

 

Clustering Genes Implicated in the Diauxic Shift

Lesson 8.9

 

Limitations of k-Means Clustering

Lesson 8.10

 

From Coin Flipping to k-Means Clustering

Lesson 8.11

Making Soft Decisions In Coin Flipping

Lesson 8.12

 

Soft k-Means Clustering

Lesson 8.13

 

Hierarchical Clustering

Lesson 8.14

 

Clustering Tumor Samples

Ch. 8 Epilogue

 
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© 2020 by Phillip Compeau & Pavel Pevzner    |    All Rights Reserved    |    ISBN: 978-0-9903746